Mixtures of Gaussian Wells: Theory, Computation and Application in Immunofluorescence Histology

I. Manolopoulou [1], T. B. Kepler [1] and D. M. Merl [2]

[1] Duke University [2] Lawrence Livermore National Laboratory

September 2011

A primary challenge in unsupervised clustering using mixture models is the selection of a family of basis distributions flexible enough to succinctly represent the distributions of the target subpopulations. In this paper we introduce a new family of Gaussian Well distributions (GWDs) for clustering applications where the target subpopulations are characterized by hollow [hyper-]elliptical structures. We develop the primary theory pertaining to the GWD, including mixtures of GWDs, selection of prior distributions, and computationally efficient inference strategies using Markov chain Monte Carlo. We demonstrate the utility of our approach, as compared to standard Gaussian mixture methods, for the case of immunofluorescence imaging analysis, emphasizing the improved interpretability and parsimony of the GWD-based model.


Matlab software implementing the analyses reported in the paper is also available here for interested readers.